PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C002654P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family Trihelix
Protein Properties Length: 179aa    MW: 19625.8 Da    PI: 8.2444
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C002654P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix52.11.7e-1624114186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W+++ + +Li+a  ++  +l+rg+l++++W++v++ +       ++ +r+ +qCk++++ ++k+yk ++++ +  + + +s++p++ +l+
  MELO3C002654P1  24 CWSEDATSTLIDAWGRRFLELNRGNLRQKDWQDVADSVnslhgLTKKTHRTDVQCKNRIDTVKKKYKTERARVSASHGNFVSSWPFYARLD 114
                     7**************************************9999999*************************99999999*********998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.6E-2622116No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MGDLTDSHTP SSANSRQVPI REDCWSEDAT STLIDAWGRR FLELNRGNLR QKDWQDVADS  60
VNSLHGLTKK THRTDVQCKN RIDTVKKKYK TERARVSASH GNFVSSWPFY ARLDELIGPT  120
VSMKKPSSPP LALPLPFHVS FRRNYSAAAA AAAAVALSEE EEDEIVGGGG GGGESERR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6819320.0LN681932.1 Cucumis melo genomic scaffold, anchoredscaffold00001.
GenBankLN7132660.0LN713266.1 Cucumis melo genomic chromosome, chr_12.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008443285.11e-100PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103486903
RefseqXP_011657694.11e-100PREDICTED: trihelix transcription factor ASIL2-like isoform X1
RefseqXP_011657705.11e-101PREDICTED: trihelix transcription factor ASIL2-like isoform X3
RefseqXP_011657707.11e-101PREDICTED: trihelix transcription factor ASIL2-like isoform X4
RefseqXP_011657712.11e-101PREDICTED: trihelix transcription factor ASIL2-like isoform X5
SwissprotQ9LJG87e-34ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A0A0LX811e-100A0A0A0LX81_CUCSA; Uncharacterized protein
STRINGVIT_10s0003g01300.t011e-70(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18873379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.15e-41sequence-specific DNA binding transcription factors